The reference to Class A only had to do with support for my comment that even more fish were being stocked on the Loyalsock basin then than they are today even if the stocking rates per acre had remained the same. Generally speaking, less waters stocked=less fish stocked. Geese!
As for your minority of brook trout moving, among the group of thirty-eight papers that have been referenced and provided here is one that said four streams were stocked with 10 trout each, 5 males and five females, from other wild trout streams. That was enough to generate much greater genetic diversity. So, yes, it does not take much movement based on that study to generate the desired effect. Furthermore, from a practical standpoint, that movement doesn’t have to naturally occur in mass to have the desired genetic effect. Multiple generations gradually making contributions over time will occur and a little movement each year or every so often is good enough, especially if so few fish in the study can infuse such positive results. The persistent and cumulative effect is what is important. And if the genetics of ST in the various tribs studied in the Loyalsock basin are so similar, then there must be enough movement between tribs to limit specialization, supporting my point.
I would also ask, what do you think happens to large year classes that occur every few years in stream species that are territorial? Fish that are present beyond the carrying capacity for various length groups are pushed from one territory to another and gradually out of the system unless they die first (via predation, disease, etc). Some of these fish undoubtedly enter other streams. The territoriality may be more unique to trout, but somewhat similarly, in years when there are large year classes of smallmouth in a Susquehanna trib, the young of year fish spill out into the river. That is not to say that with the trout I was only speaking about YOY being forced out of streams in their search for suitable habitats where they could successfully compete for a territory.
The introgression argument will become weaker over time as ST stockings are phased out. This doesn’t take into consideration the possibility that introgression can naturally be reversed, as mentioned in a recent paper that I read regarding brook trout genetics in the mid-west. I assume that the editors would have flagged that if it were of substantial debate.
As for the generalized comments about impacts on darters and their endangered or threatened relatives, reconcile that with the fact that the largest Chesapeake Logperch population in Pa co-exists with a very good, naturalized wild BT population. In fact, rather than the blacknose dace being the most abundant forage fish in that system, which would be typical for the region the Chesapeake Logperch are the most abundant by far. To my knowledge, this stream was never stocked by the PFC and it is quite possible that its population of wild BT developed through frontier movements within the lower Susquehanna.